STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc25a20-2Solute carrier family 25 member 20. (398 aa)    
Predicted Functional Partners:
prkacb
Protein kinase cAMP-activated catalytic subunit beta.
 
 
 0.958
prkaca
Protein kinase cAMP-activated catalytic subunit alpha.
 
 
 0.958
prkx
Protein kinase X-linked.
 
 
 0.941
prkar2b
Protein kinase cAMP-dependent type II regulatory subunit beta.
  
  
 
0.932
akap10
A-kinase anchoring protein 10.
    
 0.886
thap1
THAP domain containing 1.
   
 0.863
thap7
THAP domain containing 7.
   
 0.863
pla2g4a
Phospholipase A2 group IVA.
   
 
 0.850
LOC114667928
Hormone-sensitive lipase-like.
    
 0.828
lipe
Lipase E, hormone sensitive type.
    
 0.828
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.