STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcc3ATP binding cassette subfamily C member 3. (1536 aa)    
Predicted Functional Partners:
ENSECRP00000019819
annotation not available
  
 
  0.844
ENSECRP00000033615
annotation not available
 
      0.775
katnal2
Katanin catalytic subunit A1 like 2.
  
 0.682
slc9a3r2
SLC9A3 regulator 2.
   
 0.668
slc9a3r1
SLC9A3 regulator 1.
   
 0.668
ENSECRP00000000849
annotation not available
  
  0.649
gopc
Golgi associated PDZ and coiled-coil motif containing.
   
 0.645
usp10
Ubiquitin specific peptidase 10.
    
  0.640
hsdl2
Hydroxysteroid dehydrogenase like 2.
   
 0.638
ENSECRP00000005757
annotation not available
 
  
 0.622
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (20%) [HD]