STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
leng9Leukocyte receptor cluster member 9. (496 aa)    
Predicted Functional Partners:
rps14
Ribosomal protein S14.
    
 0.758
tat
Tyrosine aminotransferase.
     
 0.754
got2
Glutamic-oxaloacetic transaminase 2.
   
 
 0.719
mrps11
Mitochondrial ribosomal protein S11.
    
 0.692
got1l1
Glutamic-oxaloacetic transaminase 1 like 1.
     
 0.667
got1
Glutamic-oxaloacetic transaminase 1.
     
 0.667
hpdl
4-hydroxyphenylpyruvate dioxygenase like.
     
 0.614
LOC114655770
4-hydroxyphenylpyruvate dioxygenase-like.
     
 0.614
hpd
4-hydroxyphenylpyruvate dioxygenase.
     
 0.614
hykk
Hydroxylysine kinase.
     
 0.552
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.