STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
capns1Calpain small subunit 1. (215 aa)    
Predicted Functional Partners:
LOC114654913
Calpastatin-like.
    
 0.966
casp9
Caspase 9.
    
  0.917
ENSECRP00000029146
annotation not available
 
 
 0.905
capn5
Calpain 5.
 
 
 0.904
capn7
Calpain 7.
   
 0.899
LOC114665751
Calpain-2 catalytic subunit-like.
 
 
 0.893
LOC114648741
Calpain-5-like.
 
 
 0.887
capn15
Calpain 15.
   
 0.879
ENSECRP00000005388
annotation not available
 
 
 0.864
capn10
Calpain 10.
 
 
 0.822
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.