STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsad1Radical S-adenosyl methionine domain containing 1. (443 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.999
LOC114666740
Ubiquitin-like protein FUBI.
   
 0.999
rps11
Ribosomal protein S11.
  
 0.994
rps15
Ribosomal protein S15.
  
 0.994
rps10
Ribosomal protein S10.
   
 0.993
rps20
Ribosomal protein S20.
  
 0.993
rps8
Ribosomal protein S8.
   
 0.993
rps16
Ribosomal protein S16.
  
 0.993
rpl11
Ribosomal protein L11.
  
 0.993
rps14
Ribosomal protein S14.
  
 0.993
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.