STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbx2Chromobox 2. (578 aa)    
Predicted Functional Partners:
eed
Embryonic ectoderm development.
    
 0.971
LOC114651456
E3 ubiquitin-protein ligase RING2-A-like.
    
 0.968
rnf2
Ring finger protein 2.
    
 0.968
ENSECRP00000015197
annotation not available
    
 0.965
ENSECRP00000006476
annotation not available
    
 0.961
pcgf2
Polycomb group ring finger 2.
    
 0.961
pcgf6
Polycomb group ring finger 6.
    
 0.958
cbx4
Chromobox 4.
    
0.942
pcgf5
Polycomb group ring finger 5.
    
 0.941
pcgf1
Polycomb group ring finger 1.
    
 0.938
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.