STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam20aFAM20A golgi associated secretory pathway pseudokinase. (535 aa)    
Predicted Functional Partners:
fam20c
FAM20C golgi associated secretory pathway kinase.
  
 
0.983
LOC114662986
Extracellular serine/threonine protein kinase FAM20C-like.
  
 
0.950
fgf23
Fibroblast growth factor 23.
     
 0.680
wfs1
Wolframin ER transmembrane glycoprotein.
     
 0.662
ahsg
Alpha 2-HS glycoprotein.
     
 0.655
ENSECRP00000008572
annotation not available
     
 0.651
adam10
ADAM metallopeptidase domain 10.
   
 
  0.649
sparc
Secreted protein acidic and cysteine rich.
     
 0.645
ENSECRP00000022479
annotation not available
     
 0.645
mbtps1
Membrane bound transcription factor peptidase, site 1.
     
 0.636
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.