STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl2150S ribosomal protein L21. (104 aa)    
Predicted Functional Partners:
rpl36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.999
rpl19
50S ribosomal protein L19.
  
 
 0.999
rpl27
50S ribosomal protein L27.
  
 
 0.999
rpl9
50S ribosomal protein L9.
  
 
 0.999
rpl31
50S ribosomal protein L31.
  
 
 0.999
rpl20
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.999
R7QJT8_CHOCR
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.999
R7QK75_CHOCR
Ribosomal_L18_c domain-containing protein.
  
 
 0.999
R7QNJ5_CHOCR
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.999
R7QSW9_CHOCR
Uncharacterized protein.
  
 
 0.999
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.