STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufBCysteine desulfurase activator complex subunit SufB. (490 aa)    
Predicted Functional Partners:
sufC
Iron-sulfur cluster formation ABC transporter ATP-binding subunit.
 
 
 
 0.955
R7Q413_CHOCR
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 
 0.918
R7QFC5_CHOCR
Uncharacterized protein.
  
 0.857
R7QGL8_CHOCR
Aminotran_5 domain-containing protein.
  
 0.857
R7QP86_CHOCR
Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family.
      
 0.814
R7QRV1_CHOCR
Aminotran_5 domain-containing protein.
 
 0.804
R7Q4C4_CHOCR
Aminotran_5 domain-containing protein.
 
 0.755
R7QGB9_CHOCR
Cysteine desulfurase IscS, mitochondrial.
  
 
 0.561
R7QK37_CHOCR
VWFA domain-containing protein.
 
      0.544
ycf57
Iron-sulfur cluster assembly accessory protein.
  
 
 0.519
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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