STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7Q328_CHOCRAcetyl-coenzyme A synthetase. (664 aa)    
Predicted Functional Partners:
R7Q958_CHOCR
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.986
R7QSA7_CHOCR
Citrate synthase; Belongs to the citrate synthase family.
  
 0.985
R7QLX2_CHOCR
Aldehyde dehydrogenase, (NAD) activity; Belongs to the aldehyde dehydrogenase family.
  
 0.973
R7Q711_CHOCR
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.956
R7QDC3_CHOCR
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.956
R7QMZ0_CHOCR
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.956
S0F2R6_CHOCR
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.956
S0F2T2_CHOCR
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.956
R7QCD2_CHOCR
2-isopropylmalate synthase.
  
 
 0.946
R7QGZ5_CHOCR
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.946
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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