STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7Q384_CHOCRIntegrase catalytic domain-containing protein. (707 aa)    
Predicted Functional Partners:
R7QR85_CHOCR
Uncharacterized protein.
 
     0.719
R7QHT7_CHOCR
Uncharacterized protein.
 
     0.668
R7QC57_CHOCR
Uncharacterized protein.
 
     0.659
R7QTH4_CHOCR
Uncharacterized protein.
 
     0.653
R7QB81_CHOCR
Uncharacterized protein.
 
     0.650
R7QDG7_CHOCR
Uncharacterized protein.
 
     0.618
R7QED3_CHOCR
Uncharacterized protein.
 
     0.595
R7QRN9_CHOCR
Uncharacterized protein.
 
     0.591
R7QID3_CHOCR
Uncharacterized protein.
 
     0.590
R7QII9_CHOCR
Uncharacterized protein.
 
     0.587
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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