STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7Q562_CHOCReIF2A domain-containing protein. (361 aa)    
Predicted Functional Partners:
R7QA61_CHOCR
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 
0.965
R7QN29_CHOCR
Translation initiation factor eIF2, subunit alpha.
   
 
 0.520
R7QQK9_CHOCR
Translation initiation factor eIF-3, subunit A.
   
 
 0.505
S0F2V7_CHOCR
Translation initiation factor eIF2, subunit gamma.
   
 
 0.505
hisS
Histidine tRNA synthetase.
   
 
 0.489
R7QH58_CHOCR
AA_TRNA_LIGASE_II domain-containing protein.
   
 
 0.489
R7Q4K1_CHOCR
Uncharacterized protein.
    
 
 0.425
R7QIT8_CHOCR
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
    
 
 0.425
R7QNL0_CHOCR
Uncharacterized protein.
    
 
 0.425
R7QI07_CHOCR
Uncharacterized protein.
    
 
 0.414
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
Server load: low (26%) [HD]