STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7Q635_CHOCRRuvB-like helicase. (114 aa)    
Predicted Functional Partners:
R7QKU7_CHOCR
RuvB-like helicase.
 
  
  0.966
R7QSM6_CHOCR
RuvB-like helicase; Belongs to the RuvB family.
  
0.858
R7QJ43_CHOCR
Uncharacterized protein; Belongs to the actin family.
   
 0.668
R7QDH5_CHOCR
Uncharacterized protein.
    
 0.667
R7QN59_CHOCR
ARPC5; Belongs to the actin family.
   
 0.656
R7QMG1_CHOCR
Nucleolar protein nop56, putative.
   
 
 0.592
S0F329_CHOCR
Uncharacterized protein.
    
 0.587
R7QDB8_CHOCR
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.565
R7Q582_CHOCR
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.541
R7Q3X0_CHOCR
Box H/ACA snoRNP rRNA pseudouridine syntase component dyskerin.
   
 0.536
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.