STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7Q6V8_CHOCRUncharacterized protein. (536 aa)    
Predicted Functional Partners:
R7Q5X1_CHOCR
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
 
 0.565
rpl20
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.559
rpl21
50S ribosomal protein L21.
  
   0.549
rpl27
50S ribosomal protein L27.
  
 
 0.540
R7QBG8_CHOCR
Translation elongation factor eEF3.
   
 
0.539
R7QN29_CHOCR
Translation initiation factor eIF2, subunit alpha.
   
 0.537
R7QJQ7_CHOCR
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
   0.533
R7QNJ5_CHOCR
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.525
R7QK75_CHOCR
Ribosomal_L18_c domain-containing protein.
   
   0.523
R7Q5L0_CHOCR
ATP-binding cassette, sub-family E (RLI), member 1.
   
 
 0.518
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
Server load: low (26%) [HD]