STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7Q6Y9_CHOCRPhosphoserine aminotransferase. (417 aa)    
Predicted Functional Partners:
R7Q9F2_CHOCR
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 0.998
R7QPT7_CHOCR
Uncharacterized protein.
  
 
 0.967
R7Q990_CHOCR
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.926
R7QP14_CHOCR
Cysteine synthase CYS2.
  
 
 0.925
R7QAC6_CHOCR
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 0.921
R7Q6I8_CHOCR
Threonine synthase.
     
  0.900
R7QNX2_CHOCR
Aminotran_5 domain-containing protein.
     
  0.900
R7Q948_CHOCR
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 0.876
R7QPX1_CHOCR
Glyoxylate reductase/hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
   
 0.734
R7QHG2_CHOCR
Uncharacterized protein.
  
 
 0.683
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.