STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7Q744_CHOCRUncharacterized protein. (966 aa)    
Predicted Functional Partners:
R7QNT9_CHOCR
Uncharacterized protein.
     
 0.935
R7Q6I0_CHOCR
CYTOSOL_AP domain-containing protein.
  
 0.927
R7QJE8_CHOCR
S1 motif domain-containing protein.
     
 0.917
R7QMD7_CHOCR
Uncharacterized protein.
     
 0.917
R7QI16_CHOCR
Glutathione synthetase.
   
 
  0.908
R7Q8V1_CHOCR
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.835
R7Q990_CHOCR
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 0.835
R7QGY1_CHOCR
Serine hydroxymethyltransferase, cytosolic (Glycine hydroxymethyltransferase).
    
 0.835
S0F2S0_CHOCR
Serine hydroxymethyltransferase, cytosolic (Glycine hydroxymethyltransferase).
    
 0.835
R7QBK1_CHOCR
Aspartate aminotransferase.
   
 0.831
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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