STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7Q7L7_CHOCRCSN8_PSD8_EIF3K domain-containing protein. (270 aa)    
Predicted Functional Partners:
R7QK37_CHOCR
VWFA domain-containing protein.
   
 0.999
R7QLU7_CHOCR
PCI domain-containing protein.
   
 0.999
R7Q3I5_CHOCR
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
   
 0.998
R7Q4Z9_CHOCR
Proteasome subunit alpha type.
   
 0.998
R7QCV1_CHOCR
MPN domain-containing protein.
   
 0.998
R7QH40_CHOCR
Proteasome subunit alpha type.
   
 0.998
R7QK19_CHOCR
PCI domain-containing protein.
   
 0.998
R7QL83_CHOCR
26S proteasome subunit; Belongs to the AAA ATPase family.
   
 0.998
R7QNR1_CHOCR
26S proteasome ATP-dependent regulatory subunit; Belongs to the AAA ATPase family.
   
 0.998
R7QTK3_CHOCR
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
   
 0.998
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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