STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7Q8I5_CHOCRPeptidylprolyl isomerase. (540 aa)    
Predicted Functional Partners:
R7QME1_CHOCR
Uncharacterized protein.
   
 0.994
R7Q7X5_CHOCR
UBX domain-containing protein.
    
 0.989
R7QL55_CHOCR
Leucine rich repeat-containing protein.
   
 0.979
R7Q772_CHOCR
HECT domain-containing protein.
   
 0.933
R7Q812_CHOCR
Uncharacterized protein.
   
  0.918
R7QHF8_CHOCR
Uncharacterized protein.
     
 
0.900
R7QK37_CHOCR
VWFA domain-containing protein.
   
 0.881
R7QUY8_CHOCR
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.869
R7QQB5_CHOCR
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.861
R7Q697_CHOCR
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.860
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.