STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7Q8M3_CHOCRUncharacterized protein. (178 aa)    
Predicted Functional Partners:
R7Q2M4_CHOCR
Syntaxin; Belongs to the syntaxin family.
    
 0.997
R7QR51_CHOCR
Bet1.
    
 0.996
R7QFE4_CHOCR
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.995
R7QEE3_CHOCR
Putative vesicle transport protein; Belongs to the synaptobrevin family.
    
 
 0.985
R7QIV9_CHOCR
Uncharacterized protein.
    
 
 0.963
R7QEE8_CHOCR
Uso1_p115_head domain-containing protein.
    
 0.909
R7QHH1_CHOCR
Arginine deiminase.
    
 0.909
R7Q6Z5_CHOCR
Uncharacterized protein.
    
 0.903
R7QER7_CHOCR
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.887
R7QIW8_CHOCR
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.887
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.