STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7Q912_CHOCRLon protease homolog; Belongs to the peptidase S16 family. (918 aa)    
Predicted Functional Partners:
R7QJT3_CHOCR
Heat Shock Protein GrpE; Belongs to the GrpE family.
  
  
 0.673
R7QNW1_CHOCR
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
  
 0.673
R7Q6L9_CHOCR
TPR repeat-containing protein.
   
 0.636
clpC
Clp protease ATP binding subunit; Belongs to the ClpA/ClpB family.
  
 
 0.573
R7QL59_CHOCR
AAA_lid_9 domain-containing protein.
  
 
 0.573
S0F363_CHOCR
Uncharacterized protein; Belongs to the ClpA/ClpB family.
  
 
 0.573
R7QRS8_CHOCR
ATP-dependent zinc protease.
  
 
 0.564
R7Q5X1_CHOCR
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.532
R7Q6W4_CHOCR
Oxidative stress-dependent heat shock protein 33, GWD.
  
  
 0.518
R7QL08_CHOCR
Uncharacterized protein.
 
 
 0.491
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.