STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7Q931_CHOCRSAP domain-containing protein. (210 aa)    
Predicted Functional Partners:
R7QNS0_CHOCR
Putative ATP-dependent RNA helicase, Uap56.
   
 0.982
S0F2Z6_CHOCR
THO complex subunit 1, putative.
    
 0.889
R7Q7Q7_CHOCR
THO complex subunit 4-like.
   
 0.852
R7Q9Y4_CHOCR
Similar to Aly, THO complex subunit, putative.
   
 0.852
R7QDD4_CHOCR
THO complex subunit 2, putative.
   
 0.846
R7QLX8_CHOCR
THO complex subunit 5 homolog.
    
 0.837
R7QBY0_CHOCR
THO complex subunit 3-like.
     
 0.824
R7QCN0_CHOCR
Cleavage and polyadenylation specificity factor subunit 5.
   
 
  0.720
R7QJX8_CHOCR
Pre-mRNA cleavage complex II protein Clp1, putative.
     
 0.705
R7QUJ2_CHOCR
Nuclear cap-binding protein subunit, putative.
     
 0.704
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.