STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QB81_CHOCRUncharacterized protein. (220 aa)    
Predicted Functional Partners:
R7QG27_CHOCR
Integrase catalytic domain-containing protein.
 
     0.841
R7QQM8_CHOCR
Integrase catalytic domain-containing protein.
 
     0.822
R7QKB1_CHOCR
Integrase catalytic domain-containing protein.
 
     0.809
R7QPS2_CHOCR
Integrase catalytic domain-containing protein.
 
     0.804
R7QC71_CHOCR
Integrase catalytic domain-containing protein.
 
     0.746
R7Q586_CHOCR
Uncharacterized protein.
 
     0.713
R7QGR4_CHOCR
Integrase catalytic domain-containing protein.
 
     0.703
R7Q9Y1_CHOCR
Uncharacterized protein.
 
     0.700
R7QK84_CHOCR
Integrase catalytic domain-containing protein.
 
     0.698
R7QTJ1_CHOCR
Integrase catalytic domain-containing protein.
 
     0.669
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.