STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QBU4_CHOCRUncharacterized protein. (1592 aa)    
Predicted Functional Partners:
R7QL55_CHOCR
Leucine rich repeat-containing protein.
    
 0.666
R7QHB4_CHOCR
Serine/threonine protein kinase.
   
 0.621
R7QNH4_CHOCR
Uncharacterized protein.
    
 
 0.465
R7Q3L6_CHOCR
Serine/threonine phosphatase 2C, PP2C.
    
 
 0.420
R7QSE6_CHOCR
PPM-type phosphatase domain-containing protein.
    
 
 0.420
R7QGV1_CHOCR
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.419
R7QEH3_CHOCR
Uncharacterized protein.
    
 0.407
R7QJQ6_CHOCR
Uncharacterized protein.
    
 0.407
R7QMR6_CHOCR
Uncharacterized protein.
    
 0.407
R7QNE6_CHOCR
Uncharacterized protein.
    
 0.407
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.