STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QCJ9_CHOCRNascent polypeptide-associated complex subunit beta. (184 aa)    
Predicted Functional Partners:
R7QQI8_CHOCR
NAC-A/B domain-containing protein.
   
 
 0.998
R7QUX6_CHOCR
60S ribosomal protein L31.
   
 
 0.982
R7QNJ5_CHOCR
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.975
R7QHE3_CHOCR
Uncharacterized protein.
   
 
 0.959
R7QRP4_CHOCR
Uncharacterized protein.
   
   0.958
R7QIG4_CHOCR
Ribosomal protein L10, partial.
   
   0.951
R7QMX8_CHOCR
Uncharacterized protein.
   
   0.938
R7Q7Z0_CHOCR
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.933
R7Q712_CHOCR
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
   0.930
R7QI41_CHOCR
60S ribosomal protein L37a.
   
 
 0.927
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.