STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QCN9_CHOCRUncharacterized protein. (477 aa)    
Predicted Functional Partners:
R7QC45_CHOCR
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase.
 
  
 0.990
R7QBX7_CHOCR
4-hydroxy-3-methylbut-2-enyl diphosphate reductase.
  
  
 0.982
R7Q4N8_CHOCR
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
    
 0.807
R7Q356_CHOCR
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
     
 0.720
R7Q8C9_CHOCR
GHMP_kinases_N domain-containing protein.
 
   
 0.713
rps1
30S ribosomal protein S1.
  
 
 0.708
R7QL07_CHOCR
30S ribosomal protein S1.
  
 
 0.708
R7QN65_CHOCR
Uncharacterized protein.
  
 
 0.708
R7QF11_CHOCR
DLH domain-containing protein.
    
  0.648
hisS
Histidine tRNA synthetase.
  
  
 0.633
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.