STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QDP5_CHOCRBTB domain-containing protein. (567 aa)    
Predicted Functional Partners:
R7QN73_CHOCR
Ubiquitin carrier protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.967
R7Q2H4_CHOCR
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.862
R7Q374_CHOCR
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.862
R7QFX1_CHOCR
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.862
R7QH70_CHOCR
Uncharacterized protein; Belongs to the cullin family.
   
 0.862
R7QNI1_CHOCR
RING-box protein 1a.
    
 0.788
R7QRM1_CHOCR
PI3K/PI4K domain-containing protein.
    
 0.715
R7QPQ6_CHOCR
26S proteasome ATP-dependent regulatory subunit; Belongs to the AAA ATPase family.
   
  0.705
R7QR36_CHOCR
26S proteasome ATP-dependent regulatory subunit; Belongs to the AAA ATPase family.
   
  0.704
R7QDL2_CHOCR
26S proteasome ATP-dependent regulatory subunit; Belongs to the AAA ATPase family.
   
  0.687
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.