STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QEB2_CHOCRULP_PROTEASE domain-containing protein. (839 aa)    
Predicted Functional Partners:
R7QIH4_CHOCR
Rad60-SLD domain-containing protein.
    
 0.925
R7QUS6_CHOCR
Uncharacterized protein.
    
 0.925
R7Q3W0_CHOCR
Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
     
 0.721
R7QHU0_CHOCR
Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
     
 0.721
R7QBR8_CHOCR
ULP_PROTEASE domain-containing protein.
    
 0.693
R7QGW6_CHOCR
ULP_PROTEASE domain-containing protein.
    
0.693
R7QJA5_CHOCR
ULP_PROTEASE domain-containing protein.
    
 0.693
R7QAV5_CHOCR
Uncharacterized protein.
   
 0.665
R7QQJ6_CHOCR
Pre-mRNA cleavage complex related.
    
 0.631
R7QN73_CHOCR
Ubiquitin carrier protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.630
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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