STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QHF3_CHOCRTPR repeat-containing protein. (451 aa)    
Predicted Functional Partners:
R7QE61_CHOCR
APC1_C domain-containing protein.
   
 0.997
R7QSK8_CHOCR
CULLIN_2 domain-containing protein; Belongs to the cullin family.
  
 
 0.997
R7QTY0_CHOCR
TPR repeat-containing protein.
 
0.997
R7Q2J9_CHOCR
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.948
R7Q839_CHOCR
WD_REPEATS_REGION domain-containing protein.
   
 0.912
R7QL54_CHOCR
WD40-repeat containing protein.
   
 0.912
R7QQF7_CHOCR
WD40-repeat containing protein.
   
 0.912
R7Q7B1_CHOCR
WD_REPEATS_REGION domain-containing protein.
   
 0.906
R7Q7X6_CHOCR
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.894
R7QFN7_CHOCR
Peptidase C50 domain-containing protein.
    
 0.872
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.