STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QHT1_CHOCRUncharacterized protein. (379 aa)    
Predicted Functional Partners:
R7Q8H6_CHOCR
Uncharacterized protein.
    
 
 0.900
R7QCN6_CHOCR
Sec61 alpha subunit.
   
 
 0.786
R7QAF6_CHOCR
Uncharacterized protein.
    
   0.704
R7QK75_CHOCR
Ribosomal_L18_c domain-containing protein.
   
   0.680
R7QCS4_CHOCR
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
   0.677
R7QN89_CHOCR
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
   
   0.665
R7QC50_CHOCR
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
    
 
 0.664
R7Q325_CHOCR
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
   0.654
R7Q622_CHOCR
TPR_REGION domain-containing protein.
    
  0.654
R7Q3B7_CHOCR
Ribosomal protein L24.
   
   0.649
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.