STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QJZ8_CHOCRPHD-type domain-containing protein. (687 aa)    
Predicted Functional Partners:
R7Q7X5_CHOCR
UBX domain-containing protein.
   
  0.978
R7QB70_CHOCR
PCI domain-containing protein.
   
 0.740
R7QK37_CHOCR
VWFA domain-containing protein.
   
 0.719
R7QLU7_CHOCR
PCI domain-containing protein.
   
 0.711
R7QK19_CHOCR
PCI domain-containing protein.
   
 0.707
R7QRL7_CHOCR
PCI domain-containing protein.
   
 0.707
R7Q8W3_CHOCR
Uncharacterized protein.
   
 0.698
R7QHF7_CHOCR
PCI domain-containing protein.
   
 0.694
R7QIE5_CHOCR
RPN2_C domain-containing protein; Belongs to the proteasome subunit S1 family.
   
 0.677
R7QI51_CHOCR
Glycerophosphoryl diester phosphodiesterase.
  
 0.671
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
Server load: low (30%) [HD]