STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QKY7_CHOCRUncharacterized protein. (575 aa)    
Predicted Functional Partners:
R7Q8J9_CHOCR
Nsp1_C domain-containing protein.
   
0.980
R7QG45_CHOCR
Uncharacterized protein.
   
 0.826
R7QA75_CHOCR
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.825
R7QF23_CHOCR
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.819
R7QP53_CHOCR
Nup54 domain-containing protein.
   
 0.814
R7QGK8_CHOCR
Uncharacterized protein.
   
 0.811
R7QKX8_CHOCR
Uncharacterized protein.
    
 0.762
R7QAC1_CHOCR
Uncharacterized protein.
    
 0.667
R7Q618_CHOCR
Nuclear pore protein.
   
 0.665
R7Q9V9_CHOCR
Nuclear pore protein.
   
 0.665
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.