STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QL55_CHOCRLeucine rich repeat-containing protein. (269 aa)    
Predicted Functional Partners:
R7QTU9_CHOCR
Guanylate kinase 1.
   
 0.998
R7QUB0_CHOCR
Guanylate kinase-like domain-containing protein.
   
 0.998
R7Q7N6_CHOCR
GSDH domain-containing protein.
    
 0.993
R7QP55_CHOCR
Uncharacterized protein.
   
 0.991
R7QBA9_CHOCR
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.989
R7QFX3_CHOCR
EF-hand domain-containing protein.
    
 0.987
R7Q9B5_CHOCR
Uncharacterized protein.
   
 0.986
R7QRM1_CHOCR
PI3K/PI4K domain-containing protein.
   
 0.985
R7Q540_CHOCR
Uncharacterized protein.
    
 0.984
R7Q656_CHOCR
Uncharacterized protein.
    
 0.984
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.