STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QMA6_CHOCRR3H domain-containing protein. (1028 aa)    
Predicted Functional Partners:
R7QB31_CHOCR
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.738
R7QJT8_CHOCR
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
   0.679
R7QNJ5_CHOCR
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
    
   0.679
R7QEX3_CHOCR
Uncharacterized protein.
    
   0.671
R7Q8R5_CHOCR
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
    
   0.670
R7Q325_CHOCR
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
    
   0.660
R7QS95_CHOCR
Uncharacterized protein.
   
    0.660
R7QK75_CHOCR
Ribosomal_L18_c domain-containing protein.
    
   0.636
S0F318_CHOCR
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
    0.631
R7QHE3_CHOCR
Uncharacterized protein.
    
   0.578
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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