STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QMH1_CHOCRWD_REPEATS_REGION domain-containing protein. (118 aa)    
Predicted Functional Partners:
R7QDV4_CHOCR
WD40-repeat containing protein.
  
 
 0.558
R7QF57_CHOCR
Uncharacterized protein.
    
 0.499
R7QI51_CHOCR
Glycerophosphoryl diester phosphodiesterase.
    
 0.494
R7Q9N3_CHOCR
Uncharacterized protein.
  
 
  0.491
R7QA75_CHOCR
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.477
R7Q839_CHOCR
WD_REPEATS_REGION domain-containing protein.
  
 
 0.473
R7QK67_CHOCR
WD repeat-containing protein.
  
 
 
 0.452
R7QF23_CHOCR
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.439
R7QJ98_CHOCR
WD40-repeat containing protein.
  
     0.437
R7QRY3_CHOCR
WD40-repeat containing protein.
  
 
  0.413
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.