STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QNL4_CHOCRKetol-acid reductoisomerase; Belongs to the ketol-acid reductoisomerase family. (560 aa)    
Predicted Functional Partners:
R7QIR0_CHOCR
Dihydroxy-acid dehydratase.
  
 0.988
ilvB
Acetolactate synthase.
 
 
 0.874
R7Q478_CHOCR
TPR_REGION domain-containing protein.
  
 0.769
R7QBD6_CHOCR
UDPG_MGDP_dh_C domain-containing protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.741
S0F2W5_CHOCR
UDP-glucose dehydrogenase.
  
 
 0.741
ilvH
Acetolactate synthase small subunit.
  
 0.739
R7Q394_CHOCR
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
  
 0.644
ycf3
Photosystem I assembly protein Ycf3; Essential for the assembly of the photosystem I (PSI) complex. May act as a chaperone-like factor to guide the assembly of the PSI subunits.
  
 0.622
R7Q4Y4_CHOCR
TPR repeat-containing protein.
  
 0.622
R7Q611_CHOCR
TPR_REGION domain-containing protein.
  
 0.622
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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