STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QNP1_CHOCRUncharacterized protein. (159 aa)    
Predicted Functional Partners:
S0F2Y2_CHOCR
Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.
  
 
 0.820
R7Q4W7_CHOCR
Histidinol dehydrogenase; Belongs to the histidinol dehydrogenase family.
  
 
 0.781
R7QF07_CHOCR
Myo-inositol 1-phosphate synthase.
  
 
 0.665
R7QN95_CHOCR
Myo-inositol 1-phosphate synthase.
  
 
 0.665
R7Q5E8_CHOCR
Similar to histidinol-phosphate aminotransferase.
  
 
 0.651
R7QMW3_CHOCR
Probable histidinol-phosphate aminotransferase.
  
 
 0.651
R7Q5R1_CHOCR
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.624
R7QML4_CHOCR
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.624
R7QNY0_CHOCR
Glutamine amidotransferase type-1 domain-containing protein; Belongs to the HisA/HisF family.
  
  
 0.585
R7Q4A9_CHOCR
Uncharacterized protein; Belongs to the HisA/HisF family.
  
  
 0.575
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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