STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QPC9_CHOCRTPR repeat-containing protein. (810 aa)    
Predicted Functional Partners:
R7QG35_CHOCR
GMP synthase (Glutamine-hydrolysing).
  
 0.778
R7Q8M7_CHOCR
Indole-3-glycerol phosphate synthase.
  
 
 0.761
R7QDC1_CHOCR
IGPS domain-containing protein.
  
 
 0.761
R7Q3B1_CHOCR
Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase.
  
 
 0.753
R7QEI4_CHOCR
Putative Laforin.
   
 0.702
R7QG11_CHOCR
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 0.650
R7QPB0_CHOCR
Formyl_trans_N domain-containing protein.
  
  
 0.646
R7Q5V1_CHOCR
AMPKBI domain-containing protein.
   
 0.631
R7QCV8_CHOCR
TPR_REGION domain-containing protein.
   
 0.631
R7QND7_CHOCR
AMPK1_CBM domain-containing protein.
   
 0.631
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.