STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QPD8_CHOCRtRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. (198 aa)    
Predicted Functional Partners:
R7QRR2_CHOCR
WD_REPEATS_REGION domain-containing protein.
   
 0.984
R7Q3X0_CHOCR
Box H/ACA snoRNP rRNA pseudouridine syntase component dyskerin.
  
 
 0.752
R7QRE0_CHOCR
tRNA (adenine(58)-N(1))-methyltransferase.
  
 
 0.717
R7QMM3_CHOCR
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 
 0.709
R7QDE3_CHOCR
Similar to cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
 
      0.635
R7QSB0_CHOCR
Uncharacterized protein.
   
   0.634
R7QJI5_CHOCR
Uncharacterized protein.
   
  
 0.631
R7Q0T5_CHOCR
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.626
R7Q665_CHOCR
WD_REPEATS_REGION domain-containing protein.
   
    0.620
R7Q5K4_CHOCR
SAM-dependent MTase TRM10-type domain-containing protein.
   
 
 0.609
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.