STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QQ24_CHOCRUSP domain-containing protein; Belongs to the peptidase C19 family. (368 aa)    
Predicted Functional Partners:
R7Q4P5_CHOCR
Probable histone acetyltransferase GCN5.
    
 0.954
R7Q582_CHOCR
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.953
R7QRM1_CHOCR
PI3K/PI4K domain-containing protein.
    
 0.929
R7QQT8_CHOCR
Ribosomal-ubiquitin fusion protein.
    
  0.923
R7QGI6_CHOCR
WD_REPEATS_REGION domain-containing protein.
    
 0.871
R7QTI6_CHOCR
Transcriptional adapter.
    
 0.842
S0F2V5_CHOCR
SANT domain-containing protein.
    
 0.842
R7QB25_CHOCR
TAF domain-containing protein.
    
 0.836
R7Q6V5_CHOCR
TATA-box binding protein-associated factor 12.
    
 0.830
R7Q6L9_CHOCR
TPR repeat-containing protein.
     
 0.637
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.