STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QQM7_CHOCRAPH domain-containing protein. (287 aa)    
Predicted Functional Partners:
R7Q5X1_CHOCR
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.691
R7Q6C0_CHOCR
APH domain-containing protein.
  
     0.528
R7Q9D4_CHOCR
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 0.516
R7QB30_CHOCR
Nitrate reductase, NIA2.
  
 0.516
R7QAU7_CHOCR
APH domain-containing protein.
  
 
 0.483
R7QSB4_CHOCR
APH domain-containing protein.
  
 
 0.481
R7QBK8_CHOCR
Urea amidolyase.
  
 
 0.474
R7QDD2_CHOCR
Allophanate hydrolase.
  
 
 0.474
R7QBC1_CHOCR
Beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.446
R7QMD9_CHOCR
3-oxoacyl-[acyl-carrier-protein] synthase II, partial sequence.
  
 0.446
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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