STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QQU3_CHOCRImportin subunit alpha; Belongs to the importin alpha family. (587 aa)    
Predicted Functional Partners:
R7Q829_CHOCR
Uncharacterized protein.
   
 0.997
R7QHY1_CHOCR
Cellular apoptosis susceptibility protein, Chromosome segregation 1-like protein,Exportin.
  
 
 0.987
R7Q3D8_CHOCR
Exosome component 10 Rrp6.
    
 
 0.962
R7QG02_CHOCR
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.962
R7QUJ2_CHOCR
Nuclear cap-binding protein subunit, putative.
   
 
 0.941
R7QCJ0_CHOCR
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.920
R7Q9W3_CHOCR
Nuclear cap-binding protein subunit 2.
    
 
 0.918
R7QRD3_CHOCR
Uncharacterized protein.
   
 
 0.865
R7QRM5_CHOCR
Uncharacterized protein.
   
 
 0.865
R7QK89_CHOCR
RanBD1 domain-containing protein.
  
 
 0.849
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
Server load: low (22%) [HD]