STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QR69_CHOCRDJ-1_PfpI domain-containing protein. (218 aa)    
Predicted Functional Partners:
R7QQ00_CHOCR
Potential copper-zinc superoxide dismutase, CuZn SOD1.
  
 0.860
R7QRY5_CHOCR
Potential copper-zinc superoxide dismutase, CuZn SOD2.
  
 0.860
R7QCE3_CHOCR
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.769
R7QI02_CHOCR
Uncharacterized protein.
   
 
 0.769
R7QRM1_CHOCR
PI3K/PI4K domain-containing protein.
   
 0.704
R7QN73_CHOCR
Ubiquitin carrier protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.703
R7Q9Z6_CHOCR
Ubiquitin-conjugating enzyme.
   
 
  0.690
R7QHK2_CHOCR
Cytoplasmic dynein heavy chain.
     
 0.687
R7QPY2_CHOCR
Rhodanese domain-containing protein.
  
 
  0.677
R7QQT8_CHOCR
Ribosomal-ubiquitin fusion protein.
   
 
  0.675
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.