STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QRG6_CHOCRUncharacterized protein. (314 aa)    
Predicted Functional Partners:
R7QDZ6_CHOCR
ERCC4 domain-containing protein.
   
 0.997
R7QKV4_CHOCR
Uncharacterized protein.
    
 0.973
R7QEB5_CHOCR
To fill in.
   
 0.902
R7QJL8_CHOCR
Crossover junction endonuclease mus81.
   
 0.902
R7QK91_CHOCR
Uncharacterized protein.
   
 0.902
R7QSP7_CHOCR
Nuclear transport factor 2.
   
 0.891
R7QAT8_CHOCR
DNA repair protein complementing XPG, RAD2.
   
 0.858
R7QDE8_CHOCR
Asparaginyl-tRNA synthetase.
   
 0.840
R7QB16_CHOCR
Uncharacterized protein.
     
 0.824
R7Q7Q8_CHOCR
General transcription factor IIH subunit.
   
 
 0.815
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.