STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7QTK0_CHOCRUncharacterized protein. (360 aa)    
Predicted Functional Partners:
R7QCS8_CHOCR
Uncharacterized protein.
  
 0.609
R7Q6M2_CHOCR
PPIase cyclophilin-type domain-containing protein.
      0.597
R7QJW6_CHOCR
Uncharacterized protein.
    
 
 0.517
R7QME1_CHOCR
Uncharacterized protein.
   
  
 0.498
ccdA
Cytochrome c biogenesis protein transmembrane region.
   
    0.497
R7QDN4_CHOCR
Uncharacterized protein.
   
 0.472
R7QKZ9_CHOCR
WLM domain-containing protein.
   
 0.472
R7QCV7_CHOCR
Uncharacterized protein.
   
 0.467
R7QDN0_CHOCR
Uncharacterized protein.
   
 0.467
R7Q966_CHOCR
Uncharacterized protein.
    
 
 0.445
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.