STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S0F376_CHOCRUncharacterized protein. (368 aa)    
Predicted Functional Partners:
R7QNQ4_CHOCR
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
   
 
  0.633
R7Q8S6_CHOCR
Uncharacterized protein.
   
 
  0.530
R7QCX7_CHOCR
Uncharacterized protein.
   
 
  0.530
pdhB
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.460
R7Q9G6_CHOCR
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.460
R7QJ16_CHOCR
Branched-chain alpha-keto acid decarboxylase E1 beta subunit.
     
 0.453
R7QD07_CHOCR
Uncharacterized protein.
  
 
  0.449
R7Q7D2_CHOCR
Dihydrolipoyl dehydrogenase.
    
  0.446
R7QEJ6_CHOCR
Dihydrolipoamide dehydrogenase.
    
  0.446
R7QS79_CHOCR
DEP domain-containing protein; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
    
  0.446
Your Current Organism:
Chondrus crispus
NCBI taxonomy Id: 2769
Other names: C. crispus, Irish moss, carageen, carrageen, carragheen
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