STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEPE_0519Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. (501 aa)    
Predicted Functional Partners:
PEPE_0518
Sucrose PTS system EIIBCA or EIIBC component; TC 4.A.1.2.12; TC 4.A.1.2.12; TC 4.A.1.2.12.
 
 
 0.996
PEPE_1042
Sucrose PTS system EIIBCA or EIIBC component; TC 4.A.1; TC 4.A.1; TC 4.A.1.
 
 
 0.981
PEPE_0521
Oligo-1,6-glucosidase.
  
 
 0.978
PEPE_0517
Alpha-galactosidase.
 
  
 0.971
PEPE_0516
Branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase / fructokinase.
 
 
 0.959
PEPE_0520
Transcriptional regulator, LacI family.
 
  
 0.952
PEPE_0513
Alpha-galactosidase.
 
  
 0.949
PEPE_1442
Fructokinase / branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase.
  
 
 0.932
PEPE_0106
Beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase; Belongs to the glycosyl hydrolase 1 family.
   
 
 0.908
PEPE_0283
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
   
 
 0.908
Your Current Organism:
Pediococcus pentosaceus
NCBI taxonomy Id: 278197
Other names: P. pentosaceus ATCC 25745, Pediococcus pentosaceus ATCC 25745, Pediococcus pentosaceus str. ATCC 25745, Pediococcus pentosaceus strain ATCC 25745
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.