Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PEPE_0830 | PEPE_0831 | PEPE_0830 | PEPE_0831 | tRNA and rRNA cytosine-C5-methylase | Serine/threonine protein phosphatase | 0.924 |
PEPE_0830 | PEPE_0832 | PEPE_0830 | PEPE_0832 | tRNA and rRNA cytosine-C5-methylase | Serine/threonine kinase protein | 0.947 |
PEPE_0830 | PEPE_0834 | PEPE_0830 | PEPE_0834 | tRNA and rRNA cytosine-C5-methylase | Ribulose-5-phosphate 3-epimerase | 0.923 |
PEPE_0830 | PEPE_0835 | PEPE_0830 | PEPE_0835 | tRNA and rRNA cytosine-C5-methylase | Thiamine pyrophosphokinase | 0.900 |
PEPE_0830 | fmt | PEPE_0830 | PEPE_0829 | tRNA and rRNA cytosine-C5-methylase | methionyl-tRNA formyltransferase; Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by- (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP | 0.948 |
PEPE_0830 | rsgA | PEPE_0830 | PEPE_0833 | tRNA and rRNA cytosine-C5-methylase | GTPase; May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover | 0.915 |
PEPE_0831 | PEPE_0830 | PEPE_0831 | PEPE_0830 | Serine/threonine protein phosphatase | tRNA and rRNA cytosine-C5-methylase | 0.924 |
PEPE_0831 | PEPE_0832 | PEPE_0831 | PEPE_0832 | Serine/threonine protein phosphatase | Serine/threonine kinase protein | 0.999 |
PEPE_0831 | PEPE_0834 | PEPE_0831 | PEPE_0834 | Serine/threonine protein phosphatase | Ribulose-5-phosphate 3-epimerase | 0.905 |
PEPE_0831 | PEPE_0835 | PEPE_0831 | PEPE_0835 | Serine/threonine protein phosphatase | Thiamine pyrophosphokinase | 0.899 |
PEPE_0831 | PEPE_1556 | PEPE_0831 | PEPE_1556 | Serine/threonine protein phosphatase | Hypothetical protein | 0.967 |
PEPE_0831 | fmt | PEPE_0831 | PEPE_0829 | Serine/threonine protein phosphatase | methionyl-tRNA formyltransferase; Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by- (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP | 0.932 |
PEPE_0831 | rsgA | PEPE_0831 | PEPE_0833 | Serine/threonine protein phosphatase | GTPase; May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover | 0.909 |
PEPE_0832 | PEPE_0830 | PEPE_0832 | PEPE_0830 | Serine/threonine kinase protein | tRNA and rRNA cytosine-C5-methylase | 0.947 |
PEPE_0832 | PEPE_0831 | PEPE_0832 | PEPE_0831 | Serine/threonine kinase protein | Serine/threonine protein phosphatase | 0.999 |
PEPE_0832 | PEPE_0834 | PEPE_0832 | PEPE_0834 | Serine/threonine kinase protein | Ribulose-5-phosphate 3-epimerase | 0.939 |
PEPE_0832 | PEPE_0835 | PEPE_0832 | PEPE_0835 | Serine/threonine kinase protein | Thiamine pyrophosphokinase | 0.899 |
PEPE_0832 | PEPE_0862 | PEPE_0832 | PEPE_0862 | Serine/threonine kinase protein | Biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha | 0.910 |
PEPE_0832 | PEPE_1556 | PEPE_0832 | PEPE_1556 | Serine/threonine kinase protein | Hypothetical protein | 0.973 |
PEPE_0832 | PEPE_1792 | PEPE_0832 | PEPE_1792 | Serine/threonine kinase protein | Trypsin-like serine protease | 0.928 |
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