STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS692Rab-GAP TBC domain-containing protein. (596 aa)    
Predicted Functional Partners:
NBR_LOCUS13222
Serine/threonine-protein kinase PLK.
    
 0.855
NBR_LOCUS11604
Inactive serine/threonine-protein kinase PLK5 (inferred by orthology to a human protein).
    
 0.855
NBR_LOCUS8526
Nuclear RNAi defective-2 protein (inferred by orthology to a C. elegans protein).
    
 0.851
NBR_LOCUS7414
Ras-related protein Rab-7a (inferred by orthology to a human protein).
    
 0.768
NBR_LOCUS3450
Ras-related protein Rab-13 (inferred by orthology to a human protein).
    
 0.752
NBR_LOCUS21314
Ras-related protein Rab-10 (inferred by orthology to a human protein).
    
 0.752
NBR_LOCUS6699
Uncharacterized protein.
    
 0.743
NBR_LOCUS8530
ADP-ribosylation factor 6 (inferred by orthology to a human protein); Belongs to the small GTPase superfamily. Arf family.
   
 0.729
NBR_LOCUS18553
ADP-ribosylation factor 1-like 1 (inferred by orthology to a C. elegans protein).
   
 0.729
NBR_LOCUS5923
Putative rab15, 13, 10, 1, 35, 5, and (inferred by orthology to a S. mansoni protein).
    
 0.706
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.