STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS1021Uncharacterized protein. (604 aa)    
Predicted Functional Partners:
NBR_LOCUS14639
Myotubularin-related protein 2 (inferred by orthology to a zebrafish protein).
  
0.852
NBR_LOCUS10418
Phosphatidylinositide phosphatase SAC1 (inferred by orthology to a human protein).
     
 0.851
NBR_LOCUS480
Myotubularin-related protein 2 (inferred by orthology to a zebrafish protein).
   
0.840
NBR_LOCUS13005
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
     
 0.772
NBR_LOCUS19928
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.757
NBR_LOCUS13857
Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).
     
 0.748
NBR_LOCUS7876
Phosphatidylinositide phosphatase SAC2 (inferred by orthology to a human protein).
     
 0.746
NBR_LOCUS19090
Uncharacterized protein.
     
 0.746
NBR_LOCUS10942
Uncharacterized protein.
     
 0.702
NBR_LOCUS13161
1-phosphatidylinositol 3-phosphate 5-kinase (inferred by orthology to a human protein).
     
 0.702
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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