STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBR_LOCUS1669Histone-lysine N-methyltransferase mes-2 (inferred by orthology to a C. elegans protein). (342 aa)    
Predicted Functional Partners:
NBR_LOCUS11243
Polycomb protein mes-6 (inferred by orthology to a C. elegans protein).
    
 0.988
NBR_LOCUS9
Probable histone-binding protein lin-53 (inferred by orthology to a C. elegans protein).
    
 0.978
NBR_LOCUS6816
Probable histone-binding protein Caf1 (inferred by orthology to a D. melanogaster protein).
    
 0.978
NBR_LOCUS12461
Histone demethylase UTY (inferred by orthology to a human protein).
   
 0.927
NBR_LOCUS16038
TPR_REGION domain-containing protein.
   
 0.927
NBR_LOCUS14352
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.900
NBR_LOCUS13601
SET domain-containing protein.
   
 0.892
NBR_LOCUS1302
Putative centromere protein A (inferred by orthology to a S. mansoni protein).
   
 0.879
NBR_LOCUS4455
Histone H3; Belongs to the histone H3 family.
   
 0.879
NBR_LOCUS16083
Histone H3; Belongs to the histone H3 family.
   
 0.879
Your Current Organism:
Nippostrongylus brasiliensis
NCBI taxonomy Id: 27835
Other names: N. brasiliensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.